CDS

Accession Number TCMCG007C24658
gbkey CDS
Protein Id XP_009138427.1
Location complement(join(31939683..31939850,31939926..31940291,31940380..31940520,31940593..31940767,31940842..31940974,31941061..31941133,31941210..31941303,31941388..31941479,31941559..31941653,31941736..31941841))
Gene LCB1
GeneID 103862472
Organism Brassica rapa

Protein

Length 480aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA249065
db_source XM_009140179.3
Definition long chain base biosynthesis protein 1 [Brassica rapa]

EGGNOG-MAPPER Annotation

COG_category O
Description Long chain base biosynthesis protein
KEGG_TC -
KEGG_Module M00094        [VIEW IN KEGG]
M00099        [VIEW IN KEGG]
KEGG_Reaction R01281        [VIEW IN KEGG]
KEGG_rclass RC00004        [VIEW IN KEGG]
RC02725        [VIEW IN KEGG]
RC02849        [VIEW IN KEGG]
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko00002        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
ko01007        [VIEW IN KEGG]
KEGG_ko ko:K00654        [VIEW IN KEGG]
EC 2.3.1.50        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway ko00600        [VIEW IN KEGG]
ko01100        [VIEW IN KEGG]
ko04071        [VIEW IN KEGG]
ko04138        [VIEW IN KEGG]
map00600        [VIEW IN KEGG]
map01100        [VIEW IN KEGG]
map04071        [VIEW IN KEGG]
map04138        [VIEW IN KEGG]
GOs GO:0000003        [VIEW IN EMBL-EBI]
GO:0002178        [VIEW IN EMBL-EBI]
GO:0003006        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005783        [VIEW IN EMBL-EBI]
GO:0005789        [VIEW IN EMBL-EBI]
GO:0006066        [VIEW IN EMBL-EBI]
GO:0006629        [VIEW IN EMBL-EBI]
GO:0006643        [VIEW IN EMBL-EBI]
GO:0006644        [VIEW IN EMBL-EBI]
GO:0006665        [VIEW IN EMBL-EBI]
GO:0006667        [VIEW IN EMBL-EBI]
GO:0006670        [VIEW IN EMBL-EBI]
GO:0006672        [VIEW IN EMBL-EBI]
GO:0006684        [VIEW IN EMBL-EBI]
GO:0006686        [VIEW IN EMBL-EBI]
GO:0006793        [VIEW IN EMBL-EBI]
GO:0006796        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0007275        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0008610        [VIEW IN EMBL-EBI]
GO:0008654        [VIEW IN EMBL-EBI]
GO:0009058        [VIEW IN EMBL-EBI]
GO:0009790        [VIEW IN EMBL-EBI]
GO:0009791        [VIEW IN EMBL-EBI]
GO:0009793        [VIEW IN EMBL-EBI]
GO:0009825        [VIEW IN EMBL-EBI]
GO:0009893        [VIEW IN EMBL-EBI]
GO:0009894        [VIEW IN EMBL-EBI]
GO:0009896        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010154        [VIEW IN EMBL-EBI]
GO:0010506        [VIEW IN EMBL-EBI]
GO:0010508        [VIEW IN EMBL-EBI]
GO:0010941        [VIEW IN EMBL-EBI]
GO:0012505        [VIEW IN EMBL-EBI]
GO:0016020        [VIEW IN EMBL-EBI]
GO:0016049        [VIEW IN EMBL-EBI]
GO:0016239        [VIEW IN EMBL-EBI]
GO:0016241        [VIEW IN EMBL-EBI]
GO:0017059        [VIEW IN EMBL-EBI]
GO:0019222        [VIEW IN EMBL-EBI]
GO:0019637        [VIEW IN EMBL-EBI]
GO:0019751        [VIEW IN EMBL-EBI]
GO:0022414        [VIEW IN EMBL-EBI]
GO:0030148        [VIEW IN EMBL-EBI]
GO:0031211        [VIEW IN EMBL-EBI]
GO:0031323        [VIEW IN EMBL-EBI]
GO:0031325        [VIEW IN EMBL-EBI]
GO:0031329        [VIEW IN EMBL-EBI]
GO:0031331        [VIEW IN EMBL-EBI]
GO:0031984        [VIEW IN EMBL-EBI]
GO:0032501        [VIEW IN EMBL-EBI]
GO:0032502        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0034311        [VIEW IN EMBL-EBI]
GO:0034312        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0035339        [VIEW IN EMBL-EBI]
GO:0040007        [VIEW IN EMBL-EBI]
GO:0042175        [VIEW IN EMBL-EBI]
GO:0043067        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043603        [VIEW IN EMBL-EBI]
GO:0043604        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044249        [VIEW IN EMBL-EBI]
GO:0044255        [VIEW IN EMBL-EBI]
GO:0044271        [VIEW IN EMBL-EBI]
GO:0044281        [VIEW IN EMBL-EBI]
GO:0044283        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044425        [VIEW IN EMBL-EBI]
GO:0044432        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046165        [VIEW IN EMBL-EBI]
GO:0046173        [VIEW IN EMBL-EBI]
GO:0046467        [VIEW IN EMBL-EBI]
GO:0046511        [VIEW IN EMBL-EBI]
GO:0046512        [VIEW IN EMBL-EBI]
GO:0046513        [VIEW IN EMBL-EBI]
GO:0046519        [VIEW IN EMBL-EBI]
GO:0046520        [VIEW IN EMBL-EBI]
GO:0048316        [VIEW IN EMBL-EBI]
GO:0048518        [VIEW IN EMBL-EBI]
GO:0048522        [VIEW IN EMBL-EBI]
GO:0048608        [VIEW IN EMBL-EBI]
GO:0048731        [VIEW IN EMBL-EBI]
GO:0048856        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0061458        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0090407        [VIEW IN EMBL-EBI]
GO:0097164        [VIEW IN EMBL-EBI]
GO:0098796        [VIEW IN EMBL-EBI]
GO:0098827        [VIEW IN EMBL-EBI]
GO:1901564        [VIEW IN EMBL-EBI]
GO:1901566        [VIEW IN EMBL-EBI]
GO:1901576        [VIEW IN EMBL-EBI]
GO:1901615        [VIEW IN EMBL-EBI]
GO:1901617        [VIEW IN EMBL-EBI]
GO:1902494        [VIEW IN EMBL-EBI]
GO:1904502        [VIEW IN EMBL-EBI]
GO:1904504        [VIEW IN EMBL-EBI]
GO:1905961        [VIEW IN EMBL-EBI]
GO:1990234        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGATACGAATCTCGTGGAGATGTTCAGGGCAGGTTTGAATTGGGTGACAATGGCTCTGGATGCTCCTTCAGCTAGAGTTGTCTTGTTCGGTGTCCGAATCCAATGGCACATCTTTGTTGAAGTTTTGTTGGGTTTTGTAATTGTCATCCTCCTCTCTCAAAAGAGTTACAAACCTCCCAAGAGACCGTTAACTGAGCAGGAAATAGATGAGCTGTGTGATGAATGGGTTCCTGAGCCTCTTATACCGCCAATTACTGAAGACATGATGCATGAGCCACCAGTTCTTGAAAGTGCTGCTGGACCGCATACAACGGTTAATGGAAAAGACGTGGTGAATTTTGCGTCTGCTAATTATCTTGGACTCATTGGACACGAGAAGTTGCTGGAATCATGCACTTCTGCGTTGGAGAAATATGGCGTTGGTTCTTGTGGTCCTCGTGGATTCTATGGTACTATTGATGTTCATCTTGATTGCGAAACCAGAATATCAAAGTTTTTGAGTACTCCTGATACAATCCTTTATTCATATGGGCTTTCCACGATGTTCAGCACCATTCCTTGTTTCTGTAAAAAAGGCGATATCATTGTTGCCGACGAGGGTGTTCACTGGGGGATACAAAATGGACTTCAGCTTTCAAGAAGCACAATCGTGTACTTCAAGCACAATGACATGGACTCTCTCCGTAGCACCCTCGAGAAGATCATGACAAAGAACAAGCGCTCTAAGAACTTGAGGCGTTACATTGTAGCTGAAGCTGTATATCAGAACTCTGGTCAAATCGCACCTCTCGATGAGATAGTAAAACTGAAAGAGAAGTATAAATTTCGTGTTATATTGGACGAAAGCAACTCTTTCGGCGTGCTTGGCCGTTCCGGGAGAGGTCTTGCAGAGCATCACGGTGTCCCTATTGAGAAGATAGATGTTGTGACTGCTGCAATGGGCCACGCACTAGCCACAGAGGGTGGATTCTGCACCGGGAACGCCCGCATCATCGATTACCAGAGACTCAGCAGTTCAGGATATGTGTTCTCTGCCTCTTTGCCACCGTACCTTGCGAGCGCTGCTATCACCGCCATCGATGTCATTGATCAGAACCCTGAGTTGTTAGTTAAGATGAAGCATAACATTGCTCTGTTGTGGAAAGGATTGAAGGATATCAAGGGGATGTCGCTAGCAAGCGACCCTGAGTCACCTATTGTCTTCTTAAAGCTAGAGAAATCGAGTGGTTCGACTAAAGAGGACTTGCTTCTACTCGAGAAAATGGCTGATCGTGCGCTGAAGGAAGACTCGTTGTTGGTTGTGAGCTCTAAGAAGTCGTTTCTTGATAAGTGCCGGTTGCCTGTGGGTATCAAACTCTTGGTCTCAGCGGGACATTCAGAGTCTGATCTTGTTAAAGTATCTGAGTCTCTGAAGAGACTCGCTTCAGAGCTTCTACTCTAA
Protein:  
MDTNLVEMFRAGLNWVTMALDAPSARVVLFGVRIQWHIFVEVLLGFVIVILLSQKSYKPPKRPLTEQEIDELCDEWVPEPLIPPITEDMMHEPPVLESAAGPHTTVNGKDVVNFASANYLGLIGHEKLLESCTSALEKYGVGSCGPRGFYGTIDVHLDCETRISKFLSTPDTILYSYGLSTMFSTIPCFCKKGDIIVADEGVHWGIQNGLQLSRSTIVYFKHNDMDSLRSTLEKIMTKNKRSKNLRRYIVAEAVYQNSGQIAPLDEIVKLKEKYKFRVILDESNSFGVLGRSGRGLAEHHGVPIEKIDVVTAAMGHALATEGGFCTGNARIIDYQRLSSSGYVFSASLPPYLASAAITAIDVIDQNPELLVKMKHNIALLWKGLKDIKGMSLASDPESPIVFLKLEKSSGSTKEDLLLLEKMADRALKEDSLLVVSSKKSFLDKCRLPVGIKLLVSAGHSESDLVKVSESLKRLASELLL